ronswanson
Contents:
Introduction and demonstration
API
ronswanson
ronswanson
Index
Index
_
|
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
L
|
M
|
N
|
O
|
P
|
R
|
S
|
T
|
U
|
V
|
W
|
Y
_
__init__() (ronswanson.band_simulation.BandSimulation method)
,
[1]
(ronswanson.Database method)
,
[1]
(ronswanson.database.Database method)
,
[1]
(ronswanson.grids.EnergyGrid method)
,
[1]
(ronswanson.grids.Parameter method)
,
[1]
(ronswanson.grids.ParameterGrid method)
,
[1]
(ronswanson.ParameterGrid method)
,
[1]
(ronswanson.script_generator.PythonGatherGenerator method)
,
[1]
(ronswanson.script_generator.PythonGenerator method)
,
[1]
(ronswanson.script_generator.SLURMGatherGenerator method)
,
[1]
(ronswanson.script_generator.SLURMGenerator method)
,
[1]
(ronswanson.Simulation method)
,
[1]
(ronswanson.simulation.Simulation method)
,
[1]
(ronswanson.simulation_builder.GatherConfig method)
,
[1]
(ronswanson.simulation_builder.GatherConfigStructure method)
,
[1]
(ronswanson.simulation_builder.JobConfig method)
,
[1]
(ronswanson.simulation_builder.JobConfigStructure method)
,
[1]
(ronswanson.simulation_builder.SimulationBuilder method)
,
[1]
(ronswanson.simulation_builder.SimulationConfig method)
,
[1]
(ronswanson.simulation_builder.SimulationConfigStructure method)
,
[1]
(ronswanson.simulation_builder.SLURMTime method)
,
[1]
(ronswanson.simulation_builder.YAMLStructure method)
,
[1]
(ronswanson.SimulationBuilder method)
,
[1]
(ronswanson.utils.configuration.Logging method)
,
[1]
(ronswanson.utils.configuration.RonSwansonConfig method)
,
[1]
(ronswanson.utils.configuration.SLURM method)
,
[1]
(ronswanson.utils.logging.LogFilter method)
,
[1]
A
activate_warnings() (in module ronswanson.utils.logging)
,
[1]
at() (ronswanson.Database method)
,
[1]
(ronswanson.database.Database method)
,
[1]
at_index() (ronswanson.grids.ParameterGrid method)
,
[1]
(ronswanson.ParameterGrid method)
,
[1]
B
BandSimulation (class in ronswanson.band_simulation)
,
[1]
BLUE (ronswanson.utils.color.Colors attribute)
,
[1]
C
cartesian_jit() (in module ronswanson.utils.cartesian_product)
,
[1]
check_complete_ids() (in module ronswanson.utils.check_complete)
,
[1]
check_for_missing_parameters() (ronswanson.Database method)
,
[1]
(ronswanson.database.Database method)
,
[1]
check_for_non_contiguous_spectra() (in module ronswanson.utils.quailty_checks)
,
[1]
clean (ronswanson.simulation_builder.YAMLStructure attribute)
,
[1]
Colors (class in ronswanson.utils.color)
,
[1]
custom (ronswanson.grids.EnergyGrid attribute)
,
[1]
(ronswanson.grids.Parameter attribute)
,
[1]
D
Database (class in ronswanson)
,
[1]
(class in ronswanson.database)
,
[1]
E
energy_grid (ronswanson.Database property)
,
[1]
(ronswanson.database.Database property)
,
[1]
(ronswanson.grids.ParameterGrid attribute)
,
[1]
(ronswanson.ParameterGrid attribute)
,
[1]
EnergyGrid (class in ronswanson.grids)
,
[1]
examine_parameter() (in module ronswanson.utils.check_complete)
,
[1]
examine_parameter_detailed() (in module ronswanson.utils.check_complete)
,
[1]
F
filter() (ronswanson.utils.logging.LogFilter method)
,
[1]
finish_missing (ronswanson.simulation_builder.YAMLStructure attribute)
,
[1]
first_last_nonzero() (in module ronswanson.utils.quailty_checks)
,
[1]
from_dict() (ronswanson.grids.EnergyGrid class method)
,
[1]
(ronswanson.grids.Parameter class method)
,
[1]
(ronswanson.grids.ParameterGrid class method)
,
[1]
(ronswanson.ParameterGrid class method)
,
[1]
from_file() (ronswanson.Database class method)
,
[1]
(ronswanson.database.Database class method)
,
[1]
from_yaml() (ronswanson.grids.ParameterGrid class method)
,
[1]
(ronswanson.ParameterGrid class method)
,
[1]
(ronswanson.simulation_builder.SimulationBuilder class method)
,
[1]
(ronswanson.SimulationBuilder class method)
,
[1]
full_grid (ronswanson.grids.ParameterGrid attribute)
,
[1]
(ronswanson.ParameterGrid attribute)
,
[1]
G
gather (ronswanson.simulation_builder.YAMLStructure attribute)
,
[1]
gather() (in module ronswanson.simulation)
,
[1]
GatherConfig (class in ronswanson.simulation_builder)
,
[1]
GatherConfigStructure (class in ronswanson.simulation_builder)
,
[1]
get_continuous_cmap() (in module ronswanson.utils.colormap_generator)
,
[1]
get_path_of_data_dir() (in module ronswanson.utils.package_data)
,
[1]
get_path_of_data_file() (in module ronswanson.utils.package_data)
,
[1]
GREEN (ronswanson.utils.color.Colors attribute)
,
[1]
grid (ronswanson.grids.EnergyGrid property)
,
[1]
(ronswanson.grids.Parameter property)
,
[1]
grid_points (ronswanson.Database property)
,
[1]
(ronswanson.database.Database property)
,
[1]
H
hex_to_rgb() (in module ronswanson.utils.colormap_generator)
,
[1]
hrs (ronswanson.simulation_builder.SLURMTime attribute)
,
[1]
I
import_line (ronswanson.simulation_builder.YAMLStructure attribute)
,
[1]
int_formatter() (in module ronswanson.utils.check_complete)
,
[1]
J
JobConfig (class in ronswanson.simulation_builder)
,
[1]
JobConfigStructure (class in ronswanson.simulation_builder)
,
[1]
L
level (ronswanson.utils.configuration.Logging attribute)
,
[1]
linear_execution (ronswanson.simulation_builder.SimulationConfig attribute)
,
[1]
(ronswanson.simulation_builder.SimulationConfigStructure attribute)
,
[1]
LogFilter (class in ronswanson.utils.logging)
,
[1]
Logging (class in ronswanson.utils.configuration)
,
[1]
logging (ronswanson.utils.configuration.RonSwansonConfig attribute)
,
[1]
M
make_fig() (in module ronswanson.utils.check_complete)
,
[1]
make_fig_detailed() (in module ronswanson.utils.check_complete)
,
[1]
max_nodes (ronswanson.simulation_builder.SimulationConfig attribute)
,
[1]
(ronswanson.simulation_builder.SimulationConfigStructure attribute)
,
[1]
meta_data (ronswanson.Database property)
,
[1]
(ronswanson.database.Database property)
,
[1]
min (ronswanson.simulation_builder.SLURMTime attribute)
,
[1]
module
ronswanson
,
[1]
ronswanson.band_simulation
,
[1]
ronswanson.database
,
[1]
ronswanson.grids
,
[1]
ronswanson.script_generator
,
[1]
ronswanson.simulation
,
[1]
ronswanson.simulation_builder
,
[1]
ronswanson.utils
,
[1]
ronswanson.utils.cartesian_product
,
[1]
ronswanson.utils.check_complete
,
[1]
ronswanson.utils.color
,
[1]
ronswanson.utils.colormap_generator
,
[1]
ronswanson.utils.configuration
,
[1]
ronswanson.utils.file_open
,
[1]
ronswanson.utils.hdf5_utils
,
[1]
ronswanson.utils.logging
,
[1]
ronswanson.utils.package_data
,
[1]
ronswanson.utils.quailty_checks
,
[1]
modules (ronswanson.utils.configuration.SLURM attribute)
,
[1]
mpi_modules (ronswanson.utils.configuration.SLURM attribute)
,
[1]
N
n_cores_per_node (ronswanson.simulation_builder.GatherConfig attribute)
(ronswanson.simulation_builder.JobConfig attribute)
,
[1]
(ronswanson.simulation_builder.JobConfigStructure attribute)
,
[1]
(ronswanson.simulation_builder.SimulationConfig attribute)
n_entries (ronswanson.Database property)
,
[1]
(ronswanson.database.Database property)
,
[1]
n_gather_per_core (ronswanson.simulation_builder.GatherConfig attribute)
,
[1]
(ronswanson.simulation_builder.GatherConfigStructure attribute)
,
[1]
n_mp_jobs (ronswanson.simulation_builder.SimulationConfig attribute)
,
[1]
(ronswanson.simulation_builder.SimulationConfigStructure attribute)
,
[1]
n_parameters (ronswanson.Database property)
,
[1]
(ronswanson.database.Database property)
,
[1]
(ronswanson.grids.ParameterGrid property)
,
[1]
(ronswanson.ParameterGrid property)
,
[1]
n_points (ronswanson.grids.EnergyGrid attribute)
,
[1]
(ronswanson.grids.Parameter attribute)
,
[1]
(ronswanson.grids.ParameterGrid property)
,
[1]
(ronswanson.ParameterGrid property)
,
[1]
name (ronswanson.grids.Parameter attribute)
,
[1]
num_meta_parameters (ronswanson.simulation_builder.SimulationConfig attribute)
,
[1]
(ronswanson.simulation_builder.YAMLStructure attribute)
,
[1]
O
on (ronswanson.utils.configuration.Logging attribute)
,
[1]
open_component_file() (in module ronswanson.utils.file_open)
,
[1]
out_file (ronswanson.simulation_builder.YAMLStructure attribute)
,
[1]
P
Parameter (class in ronswanson.grids)
,
[1]
parameter_grid (ronswanson.simulation_builder.YAMLStructure attribute)
,
[1]
parameter_list (ronswanson.grids.ParameterGrid attribute)
,
[1]
(ronswanson.ParameterGrid attribute)
,
[1]
parameter_names (ronswanson.Database property)
,
[1]
(ronswanson.database.Database property)
,
[1]
(ronswanson.grids.ParameterGrid property)
,
[1]
(ronswanson.ParameterGrid property)
,
[1]
parameter_ranges (ronswanson.Database property)
,
[1]
(ronswanson.database.Database property)
,
[1]
ParameterGrid (class in ronswanson)
,
[1]
(class in ronswanson.grids)
,
[1]
plot_meta_data() (ronswanson.Database method)
,
[1]
(ronswanson.database.Database method)
,
[1]
plot_runtime() (ronswanson.Database method)
,
[1]
(ronswanson.database.Database method)
,
[1]
python (ronswanson.utils.configuration.SLURM attribute)
,
[1]
PythonGatherGenerator (class in ronswanson.script_generator)
,
[1]
PythonGenerator (class in ronswanson.script_generator)
,
[1]
R
recurse_dict() (in module ronswanson.utils.configuration)
,
[1]
RED (ronswanson.utils.color.Colors attribute)
,
[1]
replace_nan_inf_with() (ronswanson.Database method)
,
[1]
(ronswanson.database.Database method)
,
[1]
rgb_to_dec() (in module ronswanson.utils.colormap_generator)
,
[1]
ronswanson
module
,
[1]
ronswanson.band_simulation
module
,
[1]
ronswanson.database
module
,
[1]
ronswanson.grids
module
,
[1]
ronswanson.script_generator
module
,
[1]
ronswanson.simulation
module
,
[1]
ronswanson.simulation_builder
module
,
[1]
ronswanson.utils
module
,
[1]
ronswanson.utils.cartesian_product
module
,
[1]
ronswanson.utils.check_complete
module
,
[1]
ronswanson.utils.color
module
,
[1]
ronswanson.utils.colormap_generator
module
,
[1]
ronswanson.utils.configuration
module
,
[1]
ronswanson.utils.file_open
module
,
[1]
ronswanson.utils.hdf5_utils
module
,
[1]
ronswanson.utils.logging
module
,
[1]
ronswanson.utils.package_data
module
,
[1]
ronswanson.utils.quailty_checks
module
,
[1]
RonSwansonConfig (class in ronswanson.utils.configuration)
,
[1]
run() (ronswanson.Simulation method)
,
[1]
(ronswanson.simulation.Simulation method)
,
[1]
run_per_node (ronswanson.simulation_builder.SimulationConfig attribute)
,
[1]
(ronswanson.simulation_builder.SimulationConfigStructure attribute)
,
[1]
run_time (ronswanson.Database property)
,
[1]
(ronswanson.database.Database property)
,
[1]
S
scale (ronswanson.grids.EnergyGrid attribute)
,
[1]
(ronswanson.grids.Parameter attribute)
,
[1]
sec (ronswanson.simulation_builder.SLURMTime attribute)
,
[1]
setup_logger() (in module ronswanson.utils.logging)
,
[1]
show_configuration() (in module ronswanson)
,
[1]
(in module ronswanson.utils.configuration)
,
[1]
silence_warnings() (in module ronswanson.utils.logging)
,
[1]
Simulation (class in ronswanson)
,
[1]
(class in ronswanson.simulation)
,
[1]
simulation (ronswanson.simulation_builder.YAMLStructure attribute)
,
[1]
SimulationBuilder (class in ronswanson)
,
[1]
(class in ronswanson.simulation_builder)
,
[1]
SimulationConfig (class in ronswanson.simulation_builder)
,
[1]
SimulationConfigStructure (class in ronswanson.simulation_builder)
,
[1]
SLURM (class in ronswanson.utils.configuration)
,
[1]
slurm (ronswanson.utils.configuration.RonSwansonConfig attribute)
,
[1]
SLURMGatherGenerator (class in ronswanson.script_generator)
,
[1]
SLURMGenerator (class in ronswanson.script_generator)
,
[1]
SLURMTime (class in ronswanson.simulation_builder)
,
[1]
store_dir (ronswanson.utils.configuration.SLURM attribute)
,
[1]
T
time (ronswanson.simulation_builder.GatherConfig attribute)
(ronswanson.simulation_builder.JobConfig attribute)
,
[1]
(ronswanson.simulation_builder.JobConfigStructure attribute)
,
[1]
(ronswanson.simulation_builder.SimulationConfig attribute)
Timer (class in ronswanson.simulation)
,
[1]
to_3ml() (ronswanson.Database method)
,
[1]
(ronswanson.database.Database method)
,
[1]
to_dict() (ronswanson.grids.EnergyGrid method)
,
[1]
(ronswanson.grids.Parameter method)
,
[1]
(ronswanson.grids.ParameterGrid method)
,
[1]
(ronswanson.ParameterGrid method)
,
[1]
U
update_logging_level() (in module ronswanson)
,
[1]
(in module ronswanson.utils.logging)
,
[1]
use_nodes (ronswanson.simulation_builder.SimulationConfig attribute)
,
[1]
(ronswanson.simulation_builder.SimulationConfigStructure attribute)
,
[1]
user_email (ronswanson.utils.configuration.SLURM attribute)
,
[1]
V
values (ronswanson.Database property)
,
[1]
(ronswanson.database.Database property)
,
[1]
(ronswanson.grids.EnergyGrid attribute)
,
[1]
(ronswanson.grids.Parameter attribute)
,
[1]
vmax (ronswanson.grids.EnergyGrid attribute)
,
[1]
(ronswanson.grids.Parameter attribute)
,
[1]
vmin (ronswanson.grids.EnergyGrid attribute)
,
[1]
(ronswanson.grids.Parameter attribute)
,
[1]
W
write() (ronswanson.grids.ParameterGrid method)
,
[1]
(ronswanson.ParameterGrid method)
,
[1]
Y
YAMLStructure (class in ronswanson.simulation_builder)
,
[1]
YELLOW (ronswanson.utils.color.Colors attribute)
,
[1]